Alien abductions, nanobots, wormholes, etc,

leftarmofgod

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Science fiction book
Aliens abduct people and implant a device that makes the main protagonist emotionally unstable. He is a computer programmer, and he almost gets a job with the fbi, but is deemed to emotional. he wakes up on a spaceship, talks to the AI, and gets control of nanobots. He and a woman.

Thanks everyone!
 
The Quantum Connection, by Travis S Taylor. Actually the second novel in that universe, after Warp Speed.
 

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